Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3dP35276 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3dP35276 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3dP35276 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.61■□□□□ 0.25
Rab3dP35276 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rab3dP35276 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.6■□□□□ 0.25
Rab3dP35276 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rab3dP35276 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rab3dP35276 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3dP35276 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3dP35276 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.59■□□□□ 0.25
Rab3dP35276 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.59■□□□□ 0.25
Rab3dP35276 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rab3dP35276 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3dP35276 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rab3dP35276 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab3dP35276 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rab3dP35276 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3dP35276 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3dP35276 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.58■□□□□ 0.24
Rab3dP35276 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Rab3dP35276 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3dP35276 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Rab3dP35276 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rab3dP35276 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rab3dP35276 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rab3dP35276 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rab3dP35276 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.56■□□□□ 0.24
Rab3dP35276 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.56■□□□□ 0.24
Rab3dP35276 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rab3dP35276 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.56■□□□□ 0.24
Rab3dP35276 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rab3dP35276 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.55■□□□□ 0.24
Rab3dP35276 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rab3dP35276 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.55■□□□□ 0.24
Rab3dP35276 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rab3dP35276 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rab3dP35276 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.55■□□□□ 0.24
Rab3dP35276 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.55■□□□□ 0.24
Rab3dP35276 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.55■□□□□ 0.24
Rab3dP35276 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rab3dP35276 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.55■□□□□ 0.24
Rab3dP35276 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rab3dP35276 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab3dP35276 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Rab3dP35276 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rab3dP35276 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
Rab3dP35276 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rab3dP35276 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rab3dP35276 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab3dP35276 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms