Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.05■□□□□ 0.8
RxrbP28704 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RxrbP28704 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RxrbP28704 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.04■□□□□ 0.8
RxrbP28704 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RxrbP28704 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RxrbP28704 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.04■□□□□ 0.8
RxrbP28704 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RxrbP28704 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RxrbP28704 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.04■□□□□ 0.8
RxrbP28704 Cap2-205ENSMUST00000225824 1634 ntBASIC20.04■□□□□ 0.8
RxrbP28704 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RxrbP28704 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrbP28704 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RxrbP28704 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrbP28704 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
RxrbP28704 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RxrbP28704 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.03■□□□□ 0.8
RxrbP28704 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrbP28704 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrbP28704 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RxrbP28704 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RxrbP28704 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RxrbP28704 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrbP28704 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrbP28704 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RxrbP28704 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrbP28704 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrbP28704 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RxrbP28704 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrbP28704 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RxrbP28704 Gm45444-201ENSMUST00000211394 898 ntBASIC20.02■□□□□ 0.8
RxrbP28704 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.02■□□□□ 0.8
RxrbP28704 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RxrbP28704 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RxrbP28704 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RxrbP28704 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RxrbP28704 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.02■□□□□ 0.79
RxrbP28704 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RxrbP28704 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RxrbP28704 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RxrbP28704 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RxrbP28704 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RxrbP28704 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RxrbP28704 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20■□□□□ 0.79
RxrbP28704 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20■□□□□ 0.79
RxrbP28704 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RxrbP28704 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RxrbP28704 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RxrbP28704 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
RxrbP28704 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RxrbP28704 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RxrbP28704 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RxrbP28704 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RxrbP28704 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RxrbP28704 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RxrbP28704 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RxrbP28704 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RxrbP28704 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RxrbP28704 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.98■□□□□ 0.79
RxrbP28704 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.98■□□□□ 0.79
RxrbP28704 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.98■□□□□ 0.79
RxrbP28704 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RxrbP28704 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RxrbP28704 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RxrbP28704 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RxrbP28704 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RxrbP28704 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RxrbP28704 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.96■□□□□ 0.79
RxrbP28704 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RxrbP28704 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.96■□□□□ 0.79
RxrbP28704 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RxrbP28704 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms