Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Aldh1a1P24549 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Aldh1a1P24549 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Aldh1a1P24549 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Aldh1a1P24549 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Aldh1a1P24549 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.52■■□□□ 1.04
Aldh1a1P24549 Gm20760-201ENSMUST00000179197 648 ntBASIC21.52■■□□□ 1.04
Aldh1a1P24549 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Aldh1a1P24549 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Aldh1a1P24549 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Aldh1a1P24549 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Aldh1a1P24549 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Aldh1a1P24549 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Aldh1a1P24549 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Aldh1a1P24549 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.51■■□□□ 1.03
Aldh1a1P24549 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Aldh1a1P24549 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Aldh1a1P24549 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Aldh1a1P24549 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Aldh1a1P24549 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Aldh1a1P24549 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.5■■□□□ 1.03
Aldh1a1P24549 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Aldh1a1P24549 Gm10653-202ENSMUST00000139570 835 ntBASIC21.5■■□□□ 1.03
Aldh1a1P24549 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Aldh1a1P24549 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Aldh1a1P24549 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.5■■□□□ 1.03
Aldh1a1P24549 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Aldh1a1P24549 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Aldh1a1P24549 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Aldh1a1P24549 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Aldh1a1P24549 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Aldh1a1P24549 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Aldh1a1P24549 Gm4968-201ENSMUST00000071458 858 ntBASIC21.49■■□□□ 1.03
Aldh1a1P24549 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Aldh1a1P24549 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Aldh1a1P24549 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.48■■□□□ 1.03
Aldh1a1P24549 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Aldh1a1P24549 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.48■■□□□ 1.03
Aldh1a1P24549 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Aldh1a1P24549 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.48■■□□□ 1.03
Aldh1a1P24549 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Aldh1a1P24549 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.48■■□□□ 1.03
Aldh1a1P24549 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Aldh1a1P24549 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Aldh1a1P24549 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Aldh1a1P24549 Gm22240-201ENSMUST00000175225 82 ntBASIC21.47■■□□□ 1.03
Aldh1a1P24549 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.47■■□□□ 1.03
Aldh1a1P24549 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.47■■□□□ 1.03
Aldh1a1P24549 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.47■■□□□ 1.03
Aldh1a1P24549 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Aldh1a1P24549 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Aldh1a1P24549 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Aldh1a1P24549 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.44■■□□□ 1.02
Aldh1a1P24549 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Gm8520-201ENSMUST00000186517 868 ntBASIC21.44■■□□□ 1.02
Aldh1a1P24549 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.44■■□□□ 1.02
Aldh1a1P24549 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a1P24549 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Aldh1a1P24549 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.43■■□□□ 1.02
Aldh1a1P24549 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Aldh1a1P24549 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a1P24549 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a1P24549 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a1P24549 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a1P24549 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Aldh1a1P24549 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms