Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Gm12922-201ENSMUST00000120626 809 ntBASIC18.38■□□□□ 0.53
Clk1P22518 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clk1P22518 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
Clk1P22518 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.37■□□□□ 0.53
Clk1P22518 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Clk1P22518 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk1P22518 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clk1P22518 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.36■□□□□ 0.53
Clk1P22518 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.36■□□□□ 0.53
Clk1P22518 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.36■□□□□ 0.53
Clk1P22518 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Clk1P22518 Gm43530-201ENSMUST00000195920 274 ntBASIC18.36■□□□□ 0.53
Clk1P22518 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk1P22518 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk1P22518 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk1P22518 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk1P22518 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk1P22518 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.35■□□□□ 0.53
Clk1P22518 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk1P22518 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.35■□□□□ 0.53
Clk1P22518 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk1P22518 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.35■□□□□ 0.53
Clk1P22518 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk1P22518 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.35■□□□□ 0.53
Clk1P22518 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk1P22518 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk1P22518 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk1P22518 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Clk1P22518 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.34■□□□□ 0.53
Clk1P22518 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clk1P22518 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk1P22518 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk1P22518 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk1P22518 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Clk1P22518 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Clk1P22518 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clk1P22518 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clk1P22518 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Clk1P22518 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.33■□□□□ 0.52
Clk1P22518 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Clk1P22518 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk1P22518 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clk1P22518 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk1P22518 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clk1P22518 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Clk1P22518 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clk1P22518 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clk1P22518 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.31■□□□□ 0.52
Clk1P22518 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.31■□□□□ 0.52
Clk1P22518 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.31■□□□□ 0.52
Clk1P22518 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.31■□□□□ 0.52
Clk1P22518 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.31■□□□□ 0.52
Clk1P22518 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.31■□□□□ 0.52
Clk1P22518 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.31■□□□□ 0.52
Clk1P22518 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clk1P22518 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk1P22518 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Clk1P22518 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk1P22518 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clk1P22518 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk1P22518 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk1P22518 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms