Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Gm12251-201ENSMUST00000117893 792 ntBASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Gm27405-201ENSMUST00000184201 112 ntBASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tnfrsf9P20334 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.05■□□□□ 0.16
Tnfrsf9P20334 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tnfrsf9P20334 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tnfrsf9P20334 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf9P20334 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf9P20334 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf9P20334 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf9P20334 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf9P20334 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tnfrsf9P20334 Gm42642-201ENSMUST00000200683 355 ntBASIC16.02■□□□□ 0.16
Tnfrsf9P20334 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Tnfrsf9P20334 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf9P20334 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf9P20334 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf9P20334 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.02■□□□□ 0.15
Tnfrsf9P20334 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tnfrsf9P20334 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Gm10849-201ENSMUST00000100397 618 ntBASIC16.01■□□□□ 0.15
Tnfrsf9P20334 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Gm10493-201ENSMUST00000097270 612 ntBASIC16.01■□□□□ 0.15
Tnfrsf9P20334 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tnfrsf9P20334 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf9P20334 Gm4430-201ENSMUST00000192413 1943 ntBASIC16■□□□□ 0.15
Tnfrsf9P20334 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf9P20334 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf9P20334 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf9P20334 Gm26833-201ENSMUST00000180899 440 ntBASIC16■□□□□ 0.15
Tnfrsf9P20334 Gm10657-201ENSMUST00000193528 1031 ntBASIC16■□□□□ 0.15
Tnfrsf9P20334 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf9P20334 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Tnfrsf9P20334 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf9P20334 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Tnfrsf9P20334 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tnfrsf9P20334 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Gm37179-201ENSMUST00000194862 823 ntBASIC15.99■□□□□ 0.15
Tnfrsf9P20334 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tnfrsf9P20334 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms