Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim1P0C8K7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim1P0C8K7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim1P0C8K7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim1P0C8K7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim1P0C8K7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim1P0C8K7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smim1P0C8K7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smim1P0C8K7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.74□□□□□ -0.21
Smim1P0C8K7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Gm4799-201ENSMUST00000095396 657 ntBASIC13.73□□□□□ -0.21
Smim1P0C8K7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smim1P0C8K7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.72□□□□□ -0.21
Smim1P0C8K7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim1P0C8K7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim1P0C8K7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.71□□□□□ -0.22
Smim1P0C8K7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim1P0C8K7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim1P0C8K7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.7□□□□□ -0.22
Smim1P0C8K7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.7□□□□□ -0.22
Smim1P0C8K7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms