Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa4P06798 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa4P06798 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa4P06798 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa4P06798 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa4P06798 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Hoxa4P06798 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.68■□□□□ 0.74
Hoxa4P06798 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hoxa4P06798 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa4P06798 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.67■□□□□ 0.74
Hoxa4P06798 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hoxa4P06798 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.67■□□□□ 0.74
Hoxa4P06798 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.67■□□□□ 0.74
Hoxa4P06798 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hoxa4P06798 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa4P06798 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hoxa4P06798 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa4P06798 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa4P06798 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa4P06798 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa4P06798 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa4P06798 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa4P06798 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa4P06798 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Hoxa4P06798 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hoxa4P06798 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hoxa4P06798 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.65■□□□□ 0.74
Hoxa4P06798 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa4P06798 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxa4P06798 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxa4P06798 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxa4P06798 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Hoxa4P06798 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hoxa4P06798 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Hoxa4P06798 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxa4P06798 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxa4P06798 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxa4P06798 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.64■□□□□ 0.73
Hoxa4P06798 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxa4P06798 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxa4P06798 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxa4P06798 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.63■□□□□ 0.73
Hoxa4P06798 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 Smad6-203ENSMUST00000179458 273 ntBASIC19.63■□□□□ 0.73
Hoxa4P06798 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hoxa4P06798 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxa4P06798 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxa4P06798 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxa4P06798 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.62■□□□□ 0.73
Hoxa4P06798 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxa4P06798 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hoxa4P06798 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxa4P06798 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hoxa4P06798 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa4P06798 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa4P06798 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa4P06798 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa4P06798 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.6■□□□□ 0.73
Hoxa4P06798 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa4P06798 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa4P06798 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms