Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06344 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06344 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06344 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P06344 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06344 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P06344 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06344 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06344 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
P06344 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06344 Gm12251-201ENSMUST00000117893 792 ntBASIC17.75■□□□□ 0.43
P06344 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.75■□□□□ 0.43
P06344 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P06344 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06344 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06344 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
P06344 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
P06344 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P06344 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06344 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
P06344 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06344 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06344 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P06344 Gm8493-201ENSMUST00000196881 489 ntBASIC17.74■□□□□ 0.43
P06344 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P06344 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
P06344 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06344 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06344 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.73■□□□□ 0.43
P06344 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06344 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
P06344 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06344 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P06344 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06344 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
P06344 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.72■□□□□ 0.43
P06344 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06344 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.72■□□□□ 0.43
P06344 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06344 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P06344 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06344 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P06344 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
P06344 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.71■□□□□ 0.43
P06344 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.71■□□□□ 0.43
P06344 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Mir6236-201ENSMUST00000184437 123 ntBASIC17.71■□□□□ 0.43
P06344 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.71■□□□□ 0.43
P06344 Gm43017-201ENSMUST00000198296 752 ntBASIC17.71■□□□□ 0.43
P06344 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Spcs1-204ENSMUST00000226782 949 ntBASIC17.71■□□□□ 0.43
P06344 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.71■□□□□ 0.43
P06344 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
P06344 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P06344 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
P06344 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.71■□□□□ 0.42
P06344 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P06344 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
P06344 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
P06344 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.7■□□□□ 0.42
P06344 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.7■□□□□ 0.42
P06344 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
P06344 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.7■□□□□ 0.42
P06344 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
P06344 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
P06344 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.7■□□□□ 0.42
P06344 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P06344 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P06344 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
P06344 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
P06344 Gm43173-201ENSMUST00000202246 593 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms