Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
PdgfrbP05622 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PdgfrbP05622 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
PdgfrbP05622 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PdgfrbP05622 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PdgfrbP05622 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.14■□□□□ 0.81
PdgfrbP05622 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PdgfrbP05622 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.13■□□□□ 0.81
PdgfrbP05622 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PdgfrbP05622 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PdgfrbP05622 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.13■□□□□ 0.81
PdgfrbP05622 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.13■□□□□ 0.81
PdgfrbP05622 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PdgfrbP05622 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PdgfrbP05622 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.12■□□□□ 0.81
PdgfrbP05622 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PdgfrbP05622 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
PdgfrbP05622 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PdgfrbP05622 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PdgfrbP05622 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PdgfrbP05622 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PdgfrbP05622 Gm9847-201ENSMUST00000052528 599 ntBASIC20.11■□□□□ 0.81
PdgfrbP05622 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PdgfrbP05622 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PdgfrbP05622 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PdgfrbP05622 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PdgfrbP05622 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PdgfrbP05622 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdgfrbP05622 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PdgfrbP05622 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PdgfrbP05622 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PdgfrbP05622 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PdgfrbP05622 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PdgfrbP05622 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.09■□□□□ 0.81
PdgfrbP05622 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.09■□□□□ 0.81
PdgfrbP05622 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.09■□□□□ 0.81
PdgfrbP05622 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PdgfrbP05622 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PdgfrbP05622 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PdgfrbP05622 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PdgfrbP05622 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PdgfrbP05622 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PdgfrbP05622 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PdgfrbP05622 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PdgfrbP05622 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PdgfrbP05622 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PdgfrbP05622 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.08■□□□□ 0.81
PdgfrbP05622 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PdgfrbP05622 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PdgfrbP05622 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PdgfrbP05622 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PdgfrbP05622 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdgfrbP05622 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PdgfrbP05622 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.06■□□□□ 0.8
PdgfrbP05622 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PdgfrbP05622 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PdgfrbP05622 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.06■□□□□ 0.8
PdgfrbP05622 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PdgfrbP05622 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PdgfrbP05622 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PdgfrbP05622 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PdgfrbP05622 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PdgfrbP05622 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PdgfrbP05622 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PdgfrbP05622 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PdgfrbP05622 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PdgfrbP05622 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PdgfrbP05622 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms