Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Chrna1P04756 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Chrna1P04756 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna1P04756 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna1P04756 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna1P04756 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.56■■□□□ 1.04
Chrna1P04756 Gm11421-201ENSMUST00000122124 294 ntBASIC21.56■■□□□ 1.04
Chrna1P04756 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna1P04756 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna1P04756 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna1P04756 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Chrna1P04756 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna1P04756 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.55■■□□□ 1.04
Chrna1P04756 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna1P04756 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Chrna1P04756 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.55■■□□□ 1.04
Chrna1P04756 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna1P04756 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Chrna1P04756 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna1P04756 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna1P04756 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna1P04756 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.54■■□□□ 1.04
Chrna1P04756 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chrna1P04756 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
Chrna1P04756 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chrna1P04756 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chrna1P04756 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.54■■□□□ 1.04
Chrna1P04756 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chrna1P04756 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.54■■□□□ 1.04
Chrna1P04756 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Chrna1P04756 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.53■■□□□ 1.04
Chrna1P04756 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chrna1P04756 Gm26571-201ENSMUST00000181399 666 ntBASIC21.53■■□□□ 1.04
Chrna1P04756 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.53■■□□□ 1.04
Chrna1P04756 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chrna1P04756 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.52■■□□□ 1.04
Chrna1P04756 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.52■■□□□ 1.04
Chrna1P04756 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chrna1P04756 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.52■■□□□ 1.04
Chrna1P04756 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.52■■□□□ 1.04
Chrna1P04756 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chrna1P04756 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Chrna1P04756 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Chrna1P04756 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chrna1P04756 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chrna1P04756 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chrna1P04756 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chrna1P04756 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chrna1P04756 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Chrna1P04756 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chrna1P04756 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chrna1P04756 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Chrna1P04756 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.5■■□□□ 1.03
Chrna1P04756 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.5■■□□□ 1.03
Chrna1P04756 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.5■■□□□ 1.03
Chrna1P04756 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.5■■□□□ 1.03
Chrna1P04756 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna1P04756 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna1P04756 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna1P04756 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Chrna1P04756 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna1P04756 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.49■■□□□ 1.03
Chrna1P04756 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Chrna1P04756 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna1P04756 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.48■■□□□ 1.03
Chrna1P04756 Gm42642-201ENSMUST00000200683 355 ntBASIC21.48■■□□□ 1.03
Chrna1P04756 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna1P04756 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrna1P04756 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.47■■□□□ 1.03
Chrna1P04756 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrna1P04756 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrna1P04756 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrna1P04756 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.47■■□□□ 1.03
Chrna1P04756 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrna1P04756 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.46■■□□□ 1.03
Chrna1P04756 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna1P04756 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.46■■□□□ 1.03
Chrna1P04756 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Chrna1P04756 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.46■■□□□ 1.03
Chrna1P04756 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna1P04756 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna1P04756 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms