Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IghmP01872 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IghmP01872 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IghmP01872 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IghmP01872 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IghmP01872 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
IghmP01872 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IghmP01872 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IghmP01872 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.72■□□□□ 0.59
IghmP01872 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.72■□□□□ 0.59
IghmP01872 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.72■□□□□ 0.59
IghmP01872 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.72■□□□□ 0.59
IghmP01872 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
IghmP01872 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IghmP01872 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IghmP01872 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
IghmP01872 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
IghmP01872 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IghmP01872 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IghmP01872 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
IghmP01872 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IghmP01872 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IghmP01872 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
IghmP01872 Gm15546-201ENSMUST00000122095 826 ntBASIC18.71■□□□□ 0.59
IghmP01872 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IghmP01872 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IghmP01872 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.71■□□□□ 0.59
IghmP01872 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
IghmP01872 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
IghmP01872 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
IghmP01872 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IghmP01872 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
IghmP01872 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IghmP01872 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
IghmP01872 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.69■□□□□ 0.58
IghmP01872 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.69■□□□□ 0.58
IghmP01872 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.69■□□□□ 0.58
IghmP01872 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Iqck-206ENSMUST00000208658 2891 ntBASIC18.69■□□□□ 0.58
IghmP01872 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
IghmP01872 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IghmP01872 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IghmP01872 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IghmP01872 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IghmP01872 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IghmP01872 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.68■□□□□ 0.58
IghmP01872 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IghmP01872 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.68■□□□□ 0.58
IghmP01872 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.68■□□□□ 0.58
IghmP01872 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IghmP01872 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IghmP01872 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IghmP01872 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
IghmP01872 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.67■□□□□ 0.58
IghmP01872 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.67■□□□□ 0.58
IghmP01872 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IghmP01872 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.66■□□□□ 0.58
IghmP01872 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IghmP01872 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.65■□□□□ 0.58
IghmP01872 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms