Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01808 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.09■□□□□ 0.49
P01808 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.09■□□□□ 0.49
P01808 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.09■□□□□ 0.49
P01808 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01808 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01808 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
P01808 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
P01808 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01808 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
P01808 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P01808 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
P01808 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.09■□□□□ 0.49
P01808 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
P01808 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
P01808 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
P01808 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
P01808 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
P01808 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01808 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
P01808 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01808 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
P01808 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
P01808 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
P01808 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01808 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01808 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
P01808 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.07■□□□□ 0.48
P01808 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
P01808 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01808 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
P01808 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
P01808 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01808 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
P01808 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.07■□□□□ 0.48
P01808 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P01808 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P01808 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
P01808 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.06■□□□□ 0.48
P01808 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
P01808 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P01808 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01808 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
P01808 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P01808 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01808 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
P01808 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.06■□□□□ 0.48
P01808 Gm43137-201ENSMUST00000198052 594 ntBASIC18.06■□□□□ 0.48
P01808 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P01808 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P01808 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01808 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01808 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.05■□□□□ 0.48
P01808 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
P01808 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.05■□□□□ 0.48
P01808 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01808 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
P01808 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
P01808 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
P01808 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
P01808 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
P01808 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.03■□□□□ 0.48
P01808 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.03■□□□□ 0.48
P01808 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
P01808 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
P01808 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P01808 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
P01808 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
P01808 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
P01808 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
P01808 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.02■□□□□ 0.48
P01808 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
P01808 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
P01808 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.02■□□□□ 0.47
P01808 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
P01808 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
P01808 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
P01808 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01808 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01808 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01808 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01808 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
P01808 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P01808 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P01808 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01808 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms