Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Abcd4O89016 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcd4O89016 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Abcd4O89016 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.94■□□□□ 0.46
Abcd4O89016 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Abcd4O89016 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcd4O89016 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcd4O89016 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Abcd4O89016 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcd4O89016 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Abcd4O89016 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcd4O89016 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Abcd4O89016 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.92■□□□□ 0.46
Abcd4O89016 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.92■□□□□ 0.46
Abcd4O89016 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.92■□□□□ 0.46
Abcd4O89016 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Abcd4O89016 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Abcd4O89016 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcd4O89016 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Abcd4O89016 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Abcd4O89016 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.91■□□□□ 0.46
Abcd4O89016 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Abcd4O89016 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.91■□□□□ 0.46
Abcd4O89016 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.91■□□□□ 0.46
Abcd4O89016 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Abcd4O89016 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcd4O89016 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Golph3-202ENSMUST00000226517 2359 ntBASIC17.9■□□□□ 0.46
Abcd4O89016 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.9■□□□□ 0.46
Abcd4O89016 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcd4O89016 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Abcd4O89016 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Abcd4O89016 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abcd4O89016 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abcd4O89016 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abcd4O89016 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Abcd4O89016 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Abcd4O89016 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Abcd4O89016 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.88■□□□□ 0.45
Abcd4O89016 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Abcd4O89016 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Abcd4O89016 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Abcd4O89016 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.87■□□□□ 0.45
Abcd4O89016 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
Abcd4O89016 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Abcd4O89016 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Abcd4O89016 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Abcd4O89016 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.86■□□□□ 0.45
Abcd4O89016 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Abcd4O89016 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Abcd4O89016 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms