Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShdO88834 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShdO88834 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ShdO88834 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.39■□□□□ 0.86
ShdO88834 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShdO88834 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShdO88834 Gm12922-201ENSMUST00000120626 809 ntBASIC20.39■□□□□ 0.85
ShdO88834 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ShdO88834 Mir6236-201ENSMUST00000184437 123 ntBASIC20.39■□□□□ 0.85
ShdO88834 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShdO88834 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ShdO88834 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShdO88834 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.38■□□□□ 0.85
ShdO88834 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
ShdO88834 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ShdO88834 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ShdO88834 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShdO88834 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShdO88834 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ShdO88834 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ShdO88834 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.37■□□□□ 0.85
ShdO88834 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShdO88834 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.36■□□□□ 0.85
ShdO88834 Gm13241-201ENSMUST00000094493 780 ntBASIC20.36■□□□□ 0.85
ShdO88834 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ShdO88834 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShdO88834 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShdO88834 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
ShdO88834 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
ShdO88834 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShdO88834 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.35■□□□□ 0.85
ShdO88834 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ShdO88834 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ShdO88834 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShdO88834 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShdO88834 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShdO88834 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShdO88834 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShdO88834 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShdO88834 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ShdO88834 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ShdO88834 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShdO88834 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShdO88834 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ShdO88834 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ShdO88834 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.33■□□□□ 0.85
ShdO88834 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ShdO88834 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ShdO88834 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ShdO88834 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.33■□□□□ 0.85
ShdO88834 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ShdO88834 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ShdO88834 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ShdO88834 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ShdO88834 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ShdO88834 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ShdO88834 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShdO88834 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ShdO88834 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShdO88834 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ShdO88834 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShdO88834 Gm21956-201ENSMUST00000179946 522 ntBASIC20.32■□□□□ 0.84
ShdO88834 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.32■□□□□ 0.84
ShdO88834 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.32■□□□□ 0.84
ShdO88834 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShdO88834 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ShdO88834 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ShdO88834 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ShdO88834 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.31■□□□□ 0.84
ShdO88834 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
ShdO88834 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShdO88834 Notumos-201ENSMUST00000151998 2659 ntBASIC20.31■□□□□ 0.84
ShdO88834 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShdO88834 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ShdO88834 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShdO88834 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShdO88834 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ShdO88834 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShdO88834 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShdO88834 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ShdO88834 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ShdO88834 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ShdO88834 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms