Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClppO88696 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClppO88696 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClppO88696 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.31■□□□□ 0.68
ClppO88696 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClppO88696 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.3■□□□□ 0.68
ClppO88696 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ClppO88696 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.3■□□□□ 0.68
ClppO88696 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.3■□□□□ 0.68
ClppO88696 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ClppO88696 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClppO88696 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClppO88696 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClppO88696 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ClppO88696 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ClppO88696 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClppO88696 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClppO88696 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.29■□□□□ 0.68
ClppO88696 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClppO88696 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClppO88696 Gm18284-201ENSMUST00000172604 624 ntBASIC19.29■□□□□ 0.68
ClppO88696 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClppO88696 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ClppO88696 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ClppO88696 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClppO88696 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClppO88696 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ClppO88696 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ClppO88696 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.28■□□□□ 0.68
ClppO88696 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClppO88696 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ClppO88696 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.28■□□□□ 0.68
ClppO88696 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClppO88696 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.27■□□□□ 0.68
ClppO88696 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClppO88696 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClppO88696 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ClppO88696 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ClppO88696 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ClppO88696 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ClppO88696 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ClppO88696 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.27■□□□□ 0.67
ClppO88696 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ClppO88696 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
ClppO88696 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.27■□□□□ 0.67
ClppO88696 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
ClppO88696 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
ClppO88696 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.26■□□□□ 0.67
ClppO88696 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
ClppO88696 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ClppO88696 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ClppO88696 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClppO88696 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.26■□□□□ 0.67
ClppO88696 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ClppO88696 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ClppO88696 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
ClppO88696 Gm43017-201ENSMUST00000198296 752 ntBASIC19.25■□□□□ 0.67
ClppO88696 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClppO88696 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClppO88696 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClppO88696 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.24■□□□□ 0.67
ClppO88696 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ClppO88696 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ClppO88696 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.24■□□□□ 0.67
ClppO88696 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
ClppO88696 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.24■□□□□ 0.67
ClppO88696 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClppO88696 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClppO88696 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClppO88696 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ClppO88696 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.23■□□□□ 0.67
ClppO88696 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ClppO88696 Gm43173-201ENSMUST00000202246 593 ntBASIC19.23■□□□□ 0.67
ClppO88696 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ClppO88696 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ClppO88696 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ClppO88696 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClppO88696 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ClppO88696 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ClppO88696 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms