Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Becn1O88597 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Becn1O88597 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Becn1O88597 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.64■■□□□ 1.21
Becn1O88597 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.63■■□□□ 1.21
Becn1O88597 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Becn1O88597 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Becn1O88597 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Becn1O88597 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.63■■□□□ 1.21
Becn1O88597 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Becn1O88597 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Becn1O88597 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.63■■□□□ 1.21
Becn1O88597 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Becn1O88597 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
Becn1O88597 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Becn1O88597 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Becn1O88597 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
Becn1O88597 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Becn1O88597 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Becn1O88597 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Becn1O88597 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Becn1O88597 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Becn1O88597 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Becn1O88597 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Becn1O88597 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Becn1O88597 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.61■■□□□ 1.21
Becn1O88597 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.61■■□□□ 1.21
Becn1O88597 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Becn1O88597 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.6■■□□□ 1.21
Becn1O88597 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Becn1O88597 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Becn1O88597 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Becn1O88597 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Becn1O88597 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Becn1O88597 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
Becn1O88597 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Becn1O88597 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Becn1O88597 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Becn1O88597 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Becn1O88597 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.59■■□□□ 1.21
Becn1O88597 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Becn1O88597 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Becn1O88597 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Becn1O88597 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.58■■□□□ 1.21
Becn1O88597 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Becn1O88597 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Becn1O88597 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Becn1O88597 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Becn1O88597 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Becn1O88597 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Becn1O88597 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
Becn1O88597 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.57■■□□□ 1.2
Becn1O88597 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Becn1O88597 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.56■■□□□ 1.2
Becn1O88597 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Becn1O88597 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.56■■□□□ 1.2
Becn1O88597 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Becn1O88597 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.56■■□□□ 1.2
Becn1O88597 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Becn1O88597 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Becn1O88597 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Becn1O88597 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Becn1O88597 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Becn1O88597 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Becn1O88597 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Becn1O88597 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.55■■□□□ 1.2
Becn1O88597 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.55■■□□□ 1.2
Becn1O88597 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Becn1O88597 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Becn1O88597 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.54■■□□□ 1.2
Becn1O88597 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Becn1O88597 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.54■■□□□ 1.2
Becn1O88597 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.54■■□□□ 1.2
Becn1O88597 Gm43182-201ENSMUST00000199476 2528 ntBASIC22.54■■□□□ 1.2
Becn1O88597 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms