Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nid2O88322 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nid2O88322 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nid2O88322 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Nid2O88322 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
Nid2O88322 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC26.4■■□□□ 1.82
Nid2O88322 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC26.4■■□□□ 1.82
Nid2O88322 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nid2O88322 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Nid2O88322 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nid2O88322 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Nid2O88322 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nid2O88322 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nid2O88322 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC26.39■■□□□ 1.82
Nid2O88322 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Nid2O88322 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Nid2O88322 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC26.39■■□□□ 1.81
Nid2O88322 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nid2O88322 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nid2O88322 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nid2O88322 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nid2O88322 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nid2O88322 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Nid2O88322 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nid2O88322 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Nid2O88322 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nid2O88322 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nid2O88322 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Nid2O88322 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC26.37■■□□□ 1.81
Nid2O88322 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nid2O88322 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nid2O88322 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Nid2O88322 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Nid2O88322 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nid2O88322 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.35■■□□□ 1.81
Nid2O88322 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
Nid2O88322 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nid2O88322 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Nid2O88322 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nid2O88322 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nid2O88322 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Nid2O88322 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Nid2O88322 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC26.33■■□□□ 1.81
Nid2O88322 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nid2O88322 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Nid2O88322 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nid2O88322 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nid2O88322 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Nid2O88322 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nid2O88322 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC26.31■■□□□ 1.8
Nid2O88322 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nid2O88322 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nid2O88322 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nid2O88322 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nid2O88322 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nid2O88322 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
Nid2O88322 Gm12527-201ENSMUST00000117967 564 ntBASIC26.31■■□□□ 1.8
Nid2O88322 Gm13148-201ENSMUST00000118892 745 ntBASIC26.31■■□□□ 1.8
Nid2O88322 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nid2O88322 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.3■■□□□ 1.8
Nid2O88322 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nid2O88322 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nid2O88322 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nid2O88322 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.3■■□□□ 1.8
Nid2O88322 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nid2O88322 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nid2O88322 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nid2O88322 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nid2O88322 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nid2O88322 Gm20760-201ENSMUST00000179197 648 ntBASIC26.28■■□□□ 1.8
Nid2O88322 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nid2O88322 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nid2O88322 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nid2O88322 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nid2O88322 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC26.27■■□□□ 1.8
Nid2O88322 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.27■■□□□ 1.8
Nid2O88322 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nid2O88322 Gm13146-201ENSMUST00000118508 780 ntBASIC26.26■■□□□ 1.79
Nid2O88322 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nid2O88322 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nid2O88322 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nid2O88322 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Nid2O88322 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nid2O88322 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Nid2O88322 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Nid2O88322 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nid2O88322 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Nid2O88322 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Nid2O88322 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Nid2O88322 Gm43859-201ENSMUST00000200075 1412 ntBASIC26.24■■□□□ 1.79
Nid2O88322 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nid2O88322 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nid2O88322 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nid2O88322 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC26.23■■□□□ 1.79
Nid2O88322 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nid2O88322 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nid2O88322 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC26.22■■□□□ 1.79
Nid2O88322 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC26.22■■□□□ 1.79
Nid2O88322 CT010467.1-202ENSMUST00000205406 714 ntBASIC26.22■■□□□ 1.79
Nid2O88322 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms