Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim1O70400 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pdlim1O70400 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pdlim1O70400 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.68■□□□□ 0.74
Pdlim1O70400 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pdlim1O70400 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pdlim1O70400 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdlim1O70400 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdlim1O70400 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pdlim1O70400 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.68■□□□□ 0.74
Pdlim1O70400 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pdlim1O70400 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pdlim1O70400 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Pdlim1O70400 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.67■□□□□ 0.74
Pdlim1O70400 Spcs1-204ENSMUST00000226782 949 ntBASIC19.67■□□□□ 0.74
Pdlim1O70400 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim1O70400 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim1O70400 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pdlim1O70400 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim1O70400 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim1O70400 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.66■□□□□ 0.74
Pdlim1O70400 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pdlim1O70400 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pdlim1O70400 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim1O70400 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pdlim1O70400 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pdlim1O70400 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim1O70400 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim1O70400 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pdlim1O70400 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim1O70400 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim1O70400 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Pdlim1O70400 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim1O70400 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim1O70400 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pdlim1O70400 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim1O70400 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.65■□□□□ 0.74
Pdlim1O70400 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim1O70400 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pdlim1O70400 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pdlim1O70400 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pdlim1O70400 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pdlim1O70400 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pdlim1O70400 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pdlim1O70400 Mir7075-201ENSMUST00000184187 82 ntBASIC19.64■□□□□ 0.73
Pdlim1O70400 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pdlim1O70400 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pdlim1O70400 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pdlim1O70400 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pdlim1O70400 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.64■□□□□ 0.73
Pdlim1O70400 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.64■□□□□ 0.73
Pdlim1O70400 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pdlim1O70400 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim1O70400 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim1O70400 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim1O70400 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim1O70400 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim1O70400 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim1O70400 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim1O70400 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim1O70400 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pdlim1O70400 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pdlim1O70400 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim1O70400 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim1O70400 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim1O70400 Gm45417-201ENSMUST00000209533 758 ntBASIC19.62■□□□□ 0.73
Pdlim1O70400 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.62■□□□□ 0.73
Pdlim1O70400 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim1O70400 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim1O70400 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pdlim1O70400 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.61■□□□□ 0.73
Pdlim1O70400 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Pdlim1O70400 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pdlim1O70400 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim1O70400 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.6■□□□□ 0.73
Pdlim1O70400 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.6■□□□□ 0.73
Pdlim1O70400 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms