Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.87■□□□□ 0.61
Rdh5O55240 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Rdh5O55240 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rdh5O55240 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
Rdh5O55240 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.86■□□□□ 0.61
Rdh5O55240 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.86■□□□□ 0.61
Rdh5O55240 Mir6236-201ENSMUST00000184437 123 ntBASIC18.86■□□□□ 0.61
Rdh5O55240 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.86■□□□□ 0.61
Rdh5O55240 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rdh5O55240 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh5O55240 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh5O55240 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh5O55240 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh5O55240 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rdh5O55240 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.85■□□□□ 0.61
Rdh5O55240 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh5O55240 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rdh5O55240 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh5O55240 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh5O55240 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.84■□□□□ 0.61
Rdh5O55240 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.84■□□□□ 0.61
Rdh5O55240 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh5O55240 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rdh5O55240 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rdh5O55240 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rdh5O55240 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rdh5O55240 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rdh5O55240 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh5O55240 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rdh5O55240 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh5O55240 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh5O55240 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Rdh5O55240 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh5O55240 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rdh5O55240 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh5O55240 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rdh5O55240 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.82■□□□□ 0.6
Rdh5O55240 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.82■□□□□ 0.6
Rdh5O55240 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.82■□□□□ 0.6
Rdh5O55240 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.82■□□□□ 0.6
Rdh5O55240 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh5O55240 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh5O55240 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh5O55240 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rdh5O55240 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rdh5O55240 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Rdh5O55240 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Rdh5O55240 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rdh5O55240 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rdh5O55240 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh5O55240 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh5O55240 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rdh5O55240 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh5O55240 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh5O55240 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh5O55240 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.8■□□□□ 0.6
Rdh5O55240 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rdh5O55240 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rdh5O55240 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh5O55240 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.79■□□□□ 0.6
Rdh5O55240 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh5O55240 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.79■□□□□ 0.6
Rdh5O55240 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.79■□□□□ 0.6
Rdh5O55240 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh5O55240 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh5O55240 Gm21956-201ENSMUST00000179946 522 ntBASIC18.79■□□□□ 0.6
Rdh5O55240 Golgb1-201ENSMUST00000023534 498 ntBASIC18.79■□□□□ 0.6
Rdh5O55240 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh5O55240 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh5O55240 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.79■□□□□ 0.6
Rdh5O55240 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rdh5O55240 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rdh5O55240 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh5O55240 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rdh5O55240 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms