Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pja1O55176 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.07■□□□□ 0.96
Pja1O55176 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pja1O55176 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pja1O55176 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Pja1O55176 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pja1O55176 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pja1O55176 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pja1O55176 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pja1O55176 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pja1O55176 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pja1O55176 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pja1O55176 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.06■□□□□ 0.96
Pja1O55176 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pja1O55176 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pja1O55176 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pja1O55176 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pja1O55176 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pja1O55176 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.05■□□□□ 0.96
Pja1O55176 Gm40881-201ENSMUST00000223397 166 ntBASIC21.05■□□□□ 0.96
Pja1O55176 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pja1O55176 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pja1O55176 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pja1O55176 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pja1O55176 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pja1O55176 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.04■□□□□ 0.96
Pja1O55176 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pja1O55176 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.03■□□□□ 0.96
Pja1O55176 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.03■□□□□ 0.96
Pja1O55176 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pja1O55176 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pja1O55176 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pja1O55176 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.03■□□□□ 0.96
Pja1O55176 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pja1O55176 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pja1O55176 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.03■□□□□ 0.96
Pja1O55176 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pja1O55176 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pja1O55176 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pja1O55176 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pja1O55176 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pja1O55176 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pja1O55176 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pja1O55176 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pja1O55176 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pja1O55176 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.02■□□□□ 0.96
Pja1O55176 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pja1O55176 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pja1O55176 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pja1O55176 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pja1O55176 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.01■□□□□ 0.95
Pja1O55176 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.01■□□□□ 0.95
Pja1O55176 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pja1O55176 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pja1O55176 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pja1O55176 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pja1O55176 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pja1O55176 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pja1O55176 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pja1O55176 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Pja1O55176 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pja1O55176 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21■□□□□ 0.95
Pja1O55176 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pja1O55176 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pja1O55176 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pja1O55176 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pja1O55176 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pja1O55176 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pja1O55176 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Pja1O55176 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pja1O55176 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pja1O55176 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pja1O55176 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pja1O55176 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.98■□□□□ 0.95
Pja1O55176 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pja1O55176 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pja1O55176 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pja1O55176 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms