Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1bO55017 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1bO55017 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1bO55017 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cacna1bO55017 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1bO55017 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1bO55017 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.32■□□□□ 0.68
Cacna1bO55017 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1bO55017 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1bO55017 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1bO55017 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.31■□□□□ 0.68
Cacna1bO55017 Mir5133-201ENSMUST00000174955 77 ntBASIC19.31■□□□□ 0.68
Cacna1bO55017 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna1bO55017 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1bO55017 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1bO55017 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1bO55017 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cacna1bO55017 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1bO55017 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1bO55017 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1bO55017 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1bO55017 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cacna1bO55017 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1bO55017 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.29■□□□□ 0.68
Cacna1bO55017 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.29■□□□□ 0.68
Cacna1bO55017 Gm9988-201ENSMUST00000069786 435 ntBASIC19.29■□□□□ 0.68
Cacna1bO55017 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1bO55017 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1bO55017 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.29■□□□□ 0.68
Cacna1bO55017 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1bO55017 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1bO55017 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1bO55017 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.28■□□□□ 0.68
Cacna1bO55017 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1bO55017 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Cacna1bO55017 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1bO55017 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1bO55017 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cacna1bO55017 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1bO55017 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1bO55017 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1bO55017 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1bO55017 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1bO55017 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1bO55017 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1bO55017 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cacna1bO55017 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1bO55017 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1bO55017 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Cacna1bO55017 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cacna1bO55017 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1bO55017 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1bO55017 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cacna1bO55017 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1bO55017 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1bO55017 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1bO55017 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cacna1bO55017 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.25■□□□□ 0.67
Cacna1bO55017 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1bO55017 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1bO55017 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1bO55017 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cacna1bO55017 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cacna1bO55017 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1bO55017 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1bO55017 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.25■□□□□ 0.67
Cacna1bO55017 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1bO55017 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1bO55017 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1bO55017 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1bO55017 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1bO55017 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cacna1bO55017 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cacna1bO55017 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1bO55017 Gm10252-201ENSMUST00000209541 832 ntBASIC19.23■□□□□ 0.67
Cacna1bO55017 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1bO55017 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1bO55017 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1bO55017 Gm20760-201ENSMUST00000179197 648 ntBASIC19.23■□□□□ 0.67
Cacna1bO55017 Mir7071-201ENSMUST00000184847 69 ntBASIC19.23■□□□□ 0.67
Cacna1bO55017 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1bO55017 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1bO55017 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1bO55017 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1bO55017 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1bO55017 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1bO55017 Gm7290-201ENSMUST00000104990 617 ntBASIC19.22■□□□□ 0.67
Cacna1bO55017 Gm12918-201ENSMUST00000120234 636 ntBASIC19.22■□□□□ 0.67
Cacna1bO55017 Gm15710-201ENSMUST00000121821 636 ntBASIC19.22■□□□□ 0.67
Cacna1bO55017 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1bO55017 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.22■□□□□ 0.67
Cacna1bO55017 Gm5075-201ENSMUST00000196916 622 ntBASIC19.22■□□□□ 0.67
Cacna1bO55017 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms