Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn5O54942 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn5O54942 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn5O54942 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn5O54942 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cldn5O54942 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn5O54942 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cldn5O54942 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn5O54942 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn5O54942 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.75■□□□□ 0.91
Cldn5O54942 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cldn5O54942 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn5O54942 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn5O54942 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cldn5O54942 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.74■□□□□ 0.91
Cldn5O54942 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.74■□□□□ 0.91
Cldn5O54942 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Gm26833-201ENSMUST00000180899 440 ntBASIC20.74■□□□□ 0.91
Cldn5O54942 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.74■□□□□ 0.91
Cldn5O54942 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.74■□□□□ 0.91
Cldn5O54942 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.74■□□□□ 0.91
Cldn5O54942 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn5O54942 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.74■□□□□ 0.91
Cldn5O54942 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn5O54942 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn5O54942 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn5O54942 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.73■□□□□ 0.91
Cldn5O54942 Gm40848-201ENSMUST00000221998 324 ntBASIC20.73■□□□□ 0.91
Cldn5O54942 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cldn5O54942 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn5O54942 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
Cldn5O54942 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cldn5O54942 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Cldn5O54942 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn5O54942 Smad6-203ENSMUST00000179458 273 ntBASIC20.72■□□□□ 0.91
Cldn5O54942 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.72■□□□□ 0.91
Cldn5O54942 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn5O54942 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Cldn5O54942 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cldn5O54942 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cldn5O54942 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn5O54942 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Cldn5O54942 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn5O54942 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.72■□□□□ 0.91
Cldn5O54942 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn5O54942 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cldn5O54942 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn5O54942 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn5O54942 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cldn5O54942 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn5O54942 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn5O54942 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn5O54942 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn5O54942 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cldn5O54942 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn5O54942 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.71■□□□□ 0.91
Cldn5O54942 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn5O54942 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn5O54942 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn5O54942 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn5O54942 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cldn5O54942 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.69■□□□□ 0.9
Cldn5O54942 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cldn5O54942 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.69■□□□□ 0.9
Cldn5O54942 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.69■□□□□ 0.9
Cldn5O54942 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn5O54942 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn5O54942 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn5O54942 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn5O54942 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn5O54942 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn5O54942 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn5O54942 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn5O54942 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.68■□□□□ 0.9
Cldn5O54942 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn5O54942 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Cldn5O54942 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn5O54942 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn5O54942 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn5O54942 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cldn5O54942 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms