Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
DffbO54788 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
DffbO54788 Gm43566-201ENSMUST00000196851 808 ntBASIC17.05■□□□□ 0.32
DffbO54788 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.05■□□□□ 0.32
DffbO54788 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DffbO54788 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DffbO54788 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DffbO54788 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DffbO54788 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DffbO54788 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DffbO54788 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DffbO54788 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.04■□□□□ 0.32
DffbO54788 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
DffbO54788 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DffbO54788 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DffbO54788 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DffbO54788 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DffbO54788 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DffbO54788 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DffbO54788 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
DffbO54788 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DffbO54788 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DffbO54788 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DffbO54788 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DffbO54788 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DffbO54788 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DffbO54788 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.02■□□□□ 0.32
DffbO54788 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.02■□□□□ 0.32
DffbO54788 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.02■□□□□ 0.32
DffbO54788 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
DffbO54788 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
DffbO54788 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DffbO54788 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DffbO54788 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
DffbO54788 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DffbO54788 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
DffbO54788 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.01■□□□□ 0.31
DffbO54788 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.01■□□□□ 0.31
DffbO54788 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Gm10399-202ENSMUST00000202768 748 ntBASIC17.01■□□□□ 0.31
DffbO54788 Gm5921-201ENSMUST00000075898 882 ntBASIC17.01■□□□□ 0.31
DffbO54788 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DffbO54788 Hsf1-204ENSMUST00000226872 2104 ntBASIC17■□□□□ 0.31
DffbO54788 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
DffbO54788 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17■□□□□ 0.31
DffbO54788 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17■□□□□ 0.31
DffbO54788 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DffbO54788 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
DffbO54788 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17■□□□□ 0.31
DffbO54788 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17■□□□□ 0.31
DffbO54788 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17■□□□□ 0.31
DffbO54788 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DffbO54788 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DffbO54788 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DffbO54788 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.99■□□□□ 0.31
DffbO54788 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DffbO54788 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
DffbO54788 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
DffbO54788 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DffbO54788 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DffbO54788 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.98■□□□□ 0.31
DffbO54788 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DffbO54788 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DffbO54788 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
DffbO54788 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.97■□□□□ 0.31
DffbO54788 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DffbO54788 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DffbO54788 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DffbO54788 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DffbO54788 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DffbO54788 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DffbO54788 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DffbO54788 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DffbO54788 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DffbO54788 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DffbO54788 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.96■□□□□ 0.31
DffbO54788 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DffbO54788 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DffbO54788 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DffbO54788 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
DffbO54788 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
DffbO54788 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
DffbO54788 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms