Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Nr1i3O35627 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1i3O35627 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.47■■□□□ 1.03
Nr1i3O35627 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1i3O35627 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1i3O35627 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.47■■□□□ 1.03
Nr1i3O35627 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.47■■□□□ 1.03
Nr1i3O35627 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.47■■□□□ 1.03
Nr1i3O35627 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Nr1i3O35627 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1i3O35627 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1i3O35627 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1i3O35627 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nr1i3O35627 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1i3O35627 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1i3O35627 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.46■■□□□ 1.03
Nr1i3O35627 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nr1i3O35627 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Nr1i3O35627 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Nr1i3O35627 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.45■■□□□ 1.02
Nr1i3O35627 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.45■■□□□ 1.02
Nr1i3O35627 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1i3O35627 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1i3O35627 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.45■■□□□ 1.02
Nr1i3O35627 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Nr1i3O35627 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Nr1i3O35627 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1i3O35627 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1i3O35627 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1i3O35627 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nr1i3O35627 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.44■■□□□ 1.02
Nr1i3O35627 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Nr1i3O35627 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Nr1i3O35627 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nr1i3O35627 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1i3O35627 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Nr1i3O35627 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1i3O35627 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1i3O35627 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1i3O35627 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1i3O35627 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Nr1i3O35627 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1i3O35627 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nr1i3O35627 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1i3O35627 Gm15546-201ENSMUST00000122095 826 ntBASIC21.42■■□□□ 1.02
Nr1i3O35627 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.42■■□□□ 1.02
Nr1i3O35627 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1i3O35627 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1i3O35627 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1i3O35627 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nr1i3O35627 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1i3O35627 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nr1i3O35627 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1i3O35627 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nr1i3O35627 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.41■■□□□ 1.02
Nr1i3O35627 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1i3O35627 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1i3O35627 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Nr1i3O35627 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1i3O35627 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1i3O35627 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nr1i3O35627 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nr1i3O35627 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1i3O35627 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1i3O35627 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.4■■□□□ 1.02
Nr1i3O35627 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1i3O35627 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nr1i3O35627 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Nr1i3O35627 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nr1i3O35627 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Nr1i3O35627 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
Nr1i3O35627 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1i3O35627 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1i3O35627 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1i3O35627 Etf1-202ENSMUST00000180351 108 ntBASIC21.39■■□□□ 1.01
Nr1i3O35627 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.39■■□□□ 1.01
Nr1i3O35627 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
Nr1i3O35627 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.39■■□□□ 1.01
Nr1i3O35627 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1i3O35627 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1i3O35627 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nr1i3O35627 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nr1i3O35627 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1i3O35627 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1i3O35627 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nr1i3O35627 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.37■■□□□ 1.01
Nr1i3O35627 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.37■■□□□ 1.01
Nr1i3O35627 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1i3O35627 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nr1i3O35627 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.37■■□□□ 1.01
Nr1i3O35627 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms