Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a6O35544 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a6O35544 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a6O35544 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc1a6O35544 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc1a6O35544 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.64■□□□□ 0.74
Slc1a6O35544 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc1a6O35544 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Slc1a6O35544 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc1a6O35544 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc1a6O35544 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a6O35544 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a6O35544 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a6O35544 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a6O35544 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a6O35544 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Slc1a6O35544 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc1a6O35544 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.62■□□□□ 0.73
Slc1a6O35544 Gm10399-202ENSMUST00000202768 748 ntBASIC19.62■□□□□ 0.73
Slc1a6O35544 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.62■□□□□ 0.73
Slc1a6O35544 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc1a6O35544 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc1a6O35544 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc1a6O35544 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.61■□□□□ 0.73
Slc1a6O35544 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc1a6O35544 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc1a6O35544 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc1a6O35544 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc1a6O35544 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.61■□□□□ 0.73
Slc1a6O35544 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.6■□□□□ 0.73
Slc1a6O35544 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.6■□□□□ 0.73
Slc1a6O35544 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Slc1a6O35544 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc1a6O35544 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Slc1a6O35544 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.59■□□□□ 0.73
Slc1a6O35544 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.59■□□□□ 0.73
Slc1a6O35544 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Slc1a6O35544 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc1a6O35544 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc1a6O35544 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.58■□□□□ 0.73
Slc1a6O35544 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc1a6O35544 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slc1a6O35544 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slc1a6O35544 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc1a6O35544 Gm7143-201ENSMUST00000222811 859 ntBASIC19.58■□□□□ 0.72
Slc1a6O35544 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.58■□□□□ 0.72
Slc1a6O35544 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc1a6O35544 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc1a6O35544 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc1a6O35544 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc1a6O35544 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc1a6O35544 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc1a6O35544 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slc1a6O35544 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.57■□□□□ 0.72
Slc1a6O35544 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc1a6O35544 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc1a6O35544 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Slc1a6O35544 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.56■□□□□ 0.72
Slc1a6O35544 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc1a6O35544 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slc1a6O35544 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc1a6O35544 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc1a6O35544 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.55■□□□□ 0.72
Slc1a6O35544 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc1a6O35544 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Slc1a6O35544 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc1a6O35544 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms