Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk4O35493 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk4O35493 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Clk4O35493 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk4O35493 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Clk4O35493 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clk4O35493 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk4O35493 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Clk4O35493 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk4O35493 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Gm21956-201ENSMUST00000179946 522 ntBASIC18.99■□□□□ 0.63
Clk4O35493 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.99■□□□□ 0.63
Clk4O35493 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk4O35493 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.99■□□□□ 0.63
Clk4O35493 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk4O35493 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clk4O35493 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clk4O35493 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk4O35493 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.98■□□□□ 0.63
Clk4O35493 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clk4O35493 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk4O35493 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk4O35493 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk4O35493 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clk4O35493 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clk4O35493 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk4O35493 Gm12821-201ENSMUST00000120022 600 ntBASIC18.97■□□□□ 0.63
Clk4O35493 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk4O35493 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.97■□□□□ 0.63
Clk4O35493 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.97■□□□□ 0.63
Clk4O35493 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clk4O35493 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clk4O35493 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clk4O35493 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clk4O35493 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clk4O35493 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clk4O35493 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk4O35493 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk4O35493 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clk4O35493 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.94■□□□□ 0.62
Clk4O35493 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clk4O35493 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.94■□□□□ 0.62
Clk4O35493 Mir6236-201ENSMUST00000184437 123 ntBASIC18.94■□□□□ 0.62
Clk4O35493 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clk4O35493 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.94■□□□□ 0.62
Clk4O35493 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Clk4O35493 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Clk4O35493 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clk4O35493 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clk4O35493 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Clk4O35493 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clk4O35493 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.93■□□□□ 0.62
Clk4O35493 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Clk4O35493 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clk4O35493 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clk4O35493 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clk4O35493 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Clk4O35493 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clk4O35493 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.92■□□□□ 0.62
Clk4O35493 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clk4O35493 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Clk4O35493 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms