Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
Polr1aO35134 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Polr1aO35134 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Polr1aO35134 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Polr1aO35134 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
Polr1aO35134 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Polr1aO35134 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Polr1aO35134 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC31.25■■■□□ 2.59
Polr1aO35134 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC31.25■■■□□ 2.59
Polr1aO35134 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Polr1aO35134 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Polr1aO35134 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Polr1aO35134 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Polr1aO35134 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Polr1aO35134 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Polr1aO35134 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Polr1aO35134 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC31.24■■■□□ 2.59
Polr1aO35134 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Polr1aO35134 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Polr1aO35134 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Polr1aO35134 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Polr1aO35134 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC31.24■■■□□ 2.59
Polr1aO35134 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
Polr1aO35134 Gm7514-201ENSMUST00000209475 934 ntBASIC31.24■■■□□ 2.59
Polr1aO35134 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Polr1aO35134 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Polr1aO35134 Gm42555-201ENSMUST00000199304 1039 ntBASIC31.23■■■□□ 2.59
Polr1aO35134 Gm13146-201ENSMUST00000118508 780 ntBASIC31.21■■■□□ 2.59
Polr1aO35134 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC31.21■■■□□ 2.59
Polr1aO35134 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Polr1aO35134 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Polr1aO35134 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC31.21■■■□□ 2.59
Polr1aO35134 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Polr1aO35134 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Polr1aO35134 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Polr1aO35134 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC31.2■■■□□ 2.58
Polr1aO35134 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC31.19■■■□□ 2.58
Polr1aO35134 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Polr1aO35134 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC31.18■■■□□ 2.58
Polr1aO35134 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC31.18■■■□□ 2.58
Polr1aO35134 CT010467.1-202ENSMUST00000205406 714 ntBASIC31.18■■■□□ 2.58
Polr1aO35134 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC31.18■■■□□ 2.58
Polr1aO35134 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Polr1aO35134 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Polr1aO35134 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Polr1aO35134 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Polr1aO35134 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Polr1aO35134 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Polr1aO35134 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Polr1aO35134 Gm12441-201ENSMUST00000121806 588 ntBASIC31.16■■■□□ 2.58
Polr1aO35134 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Polr1aO35134 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Polr1aO35134 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC31.16■■■□□ 2.58
Polr1aO35134 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Polr1aO35134 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Polr1aO35134 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC31.15■■■□□ 2.58
Polr1aO35134 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC31.15■■■□□ 2.58
Polr1aO35134 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC31.15■■■□□ 2.58
Polr1aO35134 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Polr1aO35134 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Polr1aO35134 Mir5133-201ENSMUST00000174955 77 ntBASIC31.15■■■□□ 2.58
Polr1aO35134 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Polr1aO35134 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Polr1aO35134 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Polr1aO35134 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Polr1aO35134 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Polr1aO35134 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Polr1aO35134 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Polr1aO35134 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Polr1aO35134 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Polr1aO35134 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Polr1aO35134 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC31.13■■■□□ 2.57
Polr1aO35134 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Polr1aO35134 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Polr1aO35134 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Polr1aO35134 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Polr1aO35134 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Polr1aO35134 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
Polr1aO35134 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Polr1aO35134 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Polr1aO35134 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Polr1aO35134 Gm13148-201ENSMUST00000118892 745 ntBASIC31.1■■■□□ 2.57
Polr1aO35134 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Polr1aO35134 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Polr1aO35134 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Polr1aO35134 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Polr1aO35134 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Polr1aO35134 Gm4968-201ENSMUST00000071458 858 ntBASIC31.08■■■□□ 2.57
Polr1aO35134 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Polr1aO35134 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Polr1aO35134 Nespas-201ENSMUST00000143738 1083 ntBASIC31.07■■■□□ 2.56
Polr1aO35134 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Polr1aO35134 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Polr1aO35134 Gm26766-202ENSMUST00000227544 2347 ntBASIC31.07■■■□□ 2.56
Polr1aO35134 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Polr1aO35134 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Polr1aO35134 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Polr1aO35134 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Polr1aO35134 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
Polr1aO35134 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC31.07■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms