Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr2jO08740 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2jO08740 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2jO08740 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2jO08740 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.1■□□□□ 0.65
Polr2jO08740 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.1■□□□□ 0.65
Polr2jO08740 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2jO08740 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr2jO08740 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr2jO08740 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr2jO08740 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.09■□□□□ 0.65
Polr2jO08740 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.09■□□□□ 0.65
Polr2jO08740 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Polr2jO08740 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr2jO08740 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr2jO08740 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr2jO08740 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr2jO08740 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.08■□□□□ 0.64
Polr2jO08740 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
Polr2jO08740 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.08■□□□□ 0.64
Polr2jO08740 Gm7143-201ENSMUST00000222811 859 ntBASIC19.08■□□□□ 0.64
Polr2jO08740 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr2jO08740 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Polr2jO08740 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Gm10232-201ENSMUST00000089221 720 ntBASIC19.07■□□□□ 0.64
Polr2jO08740 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr2jO08740 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Polr2jO08740 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Polr2jO08740 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
Polr2jO08740 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.06■□□□□ 0.64
Polr2jO08740 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr2jO08740 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Polr2jO08740 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr2jO08740 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr2jO08740 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
Polr2jO08740 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.05■□□□□ 0.64
Polr2jO08740 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.05■□□□□ 0.64
Polr2jO08740 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr2jO08740 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Polr2jO08740 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Polr2jO08740 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr2jO08740 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr2jO08740 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr2jO08740 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Polr2jO08740 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr2jO08740 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr2jO08740 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Polr2jO08740 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Polr2jO08740 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr2jO08740 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Polr2jO08740 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr2jO08740 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr2jO08740 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr2jO08740 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Polr2jO08740 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Polr2jO08740 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.02■□□□□ 0.64
Polr2jO08740 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Polr2jO08740 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.01■□□□□ 0.63
Polr2jO08740 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr2jO08740 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr2jO08740 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr2jO08740 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Polr2jO08740 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr2jO08740 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Polr2jO08740 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.01■□□□□ 0.63
Polr2jO08740 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Polr2jO08740 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr2jO08740 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms