Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1cO08604 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1cO08604 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1cO08604 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1cO08604 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.78■□□□□ 0.44
Raet1cO08604 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Raet1cO08604 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Raet1cO08604 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Raet1cO08604 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1cO08604 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1cO08604 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Raet1cO08604 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.77■□□□□ 0.44
Raet1cO08604 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.77■□□□□ 0.44
Raet1cO08604 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.77■□□□□ 0.44
Raet1cO08604 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Raet1cO08604 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Raet1cO08604 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1cO08604 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Raet1cO08604 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.75■□□□□ 0.43
Raet1cO08604 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.75■□□□□ 0.43
Raet1cO08604 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.75■□□□□ 0.43
Raet1cO08604 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1cO08604 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Raet1cO08604 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
Raet1cO08604 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Raet1cO08604 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1cO08604 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Raet1cO08604 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1cO08604 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1cO08604 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Raet1cO08604 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1cO08604 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Raet1cO08604 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.73■□□□□ 0.43
Raet1cO08604 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1cO08604 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.73■□□□□ 0.43
Raet1cO08604 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
Raet1cO08604 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1cO08604 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1cO08604 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1cO08604 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1cO08604 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1cO08604 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.72■□□□□ 0.43
Raet1cO08604 Mir6236-201ENSMUST00000184437 123 ntBASIC17.72■□□□□ 0.43
Raet1cO08604 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1cO08604 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1cO08604 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1cO08604 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1cO08604 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.71■□□□□ 0.43
Raet1cO08604 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1cO08604 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Raet1cO08604 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1cO08604 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Raet1cO08604 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1cO08604 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1cO08604 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1cO08604 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.7■□□□□ 0.42
Raet1cO08604 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.7■□□□□ 0.42
Raet1cO08604 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.7■□□□□ 0.42
Raet1cO08604 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1cO08604 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.7■□□□□ 0.42
Raet1cO08604 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Raet1cO08604 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1cO08604 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1cO08604 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms