Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10553J3QPF1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10553J3QPF1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10553J3QPF1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10553J3QPF1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Mir7075-201ENSMUST00000184187 82 ntBASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10553J3QPF1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10553J3QPF1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10553J3QPF1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.16■□□□□ 0.02
Gm10553J3QPF1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm10553J3QPF1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm10553J3QPF1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms