Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.56■■□□□ 1.2
B020004C17RikJ3QP07 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
B020004C17RikJ3QP07 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
B020004C17RikJ3QP07 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
B020004C17RikJ3QP07 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
B020004C17RikJ3QP07 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
B020004C17RikJ3QP07 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
B020004C17RikJ3QP07 Gm12441-201ENSMUST00000121806 588 ntBASIC22.53■■□□□ 1.2
B020004C17RikJ3QP07 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
B020004C17RikJ3QP07 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
B020004C17RikJ3QP07 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
B020004C17RikJ3QP07 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
B020004C17RikJ3QP07 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
B020004C17RikJ3QP07 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
B020004C17RikJ3QP07 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
B020004C17RikJ3QP07 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.52■■□□□ 1.2
B020004C17RikJ3QP07 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
B020004C17RikJ3QP07 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
B020004C17RikJ3QP07 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.52■■□□□ 1.2
B020004C17RikJ3QP07 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.52■■□□□ 1.2
B020004C17RikJ3QP07 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
B020004C17RikJ3QP07 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.51■■□□□ 1.19
B020004C17RikJ3QP07 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.51■■□□□ 1.19
B020004C17RikJ3QP07 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.51■■□□□ 1.19
B020004C17RikJ3QP07 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.51■■□□□ 1.19
B020004C17RikJ3QP07 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
B020004C17RikJ3QP07 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 Mir5133-201ENSMUST00000174955 77 ntBASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
B020004C17RikJ3QP07 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
B020004C17RikJ3QP07 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
B020004C17RikJ3QP07 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
B020004C17RikJ3QP07 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
B020004C17RikJ3QP07 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
B020004C17RikJ3QP07 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
B020004C17RikJ3QP07 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
B020004C17RikJ3QP07 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.47■■□□□ 1.19
B020004C17RikJ3QP07 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
B020004C17RikJ3QP07 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
B020004C17RikJ3QP07 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.45■■□□□ 1.18
B020004C17RikJ3QP07 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
B020004C17RikJ3QP07 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
B020004C17RikJ3QP07 Gm13146-201ENSMUST00000118508 780 ntBASIC22.44■■□□□ 1.18
B020004C17RikJ3QP07 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
B020004C17RikJ3QP07 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
B020004C17RikJ3QP07 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
B020004C17RikJ3QP07 Gm4968-201ENSMUST00000071458 858 ntBASIC22.44■■□□□ 1.18
B020004C17RikJ3QP07 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
B020004C17RikJ3QP07 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
B020004C17RikJ3QP07 Nespas-201ENSMUST00000143738 1083 ntBASIC22.43■■□□□ 1.18
B020004C17RikJ3QP07 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
B020004C17RikJ3QP07 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms