Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trav13d-3J3QMG8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13d-3J3QMG8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav13d-3J3QMG8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav13d-3J3QMG8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav13d-3J3QMG8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13d-3J3QMG8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav13d-3J3QMG8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav13d-3J3QMG8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13d-3J3QMG8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13d-3J3QMG8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-3J3QMG8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav13d-3J3QMG8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav13d-3J3QMG8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav13d-3J3QMG8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-3J3QMG8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Gm9847-201ENSMUST00000052528 599 ntBASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav13d-3J3QMG8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trav13d-3J3QMG8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav13d-3J3QMG8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13d-3J3QMG8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms