Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3139J3QK78 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.93■□□□□ 0.78
Gm3139J3QK78 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3139J3QK78 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Gm3139J3QK78 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3139J3QK78 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3139J3QK78 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.91■□□□□ 0.78
Gm3139J3QK78 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3139J3QK78 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Gm3139J3QK78 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3139J3QK78 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3139J3QK78 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Gm3139J3QK78 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3139J3QK78 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3139J3QK78 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3139J3QK78 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.9■□□□□ 0.78
Gm3139J3QK78 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.9■□□□□ 0.78
Gm3139J3QK78 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3139J3QK78 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3139J3QK78 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Gm3139J3QK78 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3139J3QK78 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm3139J3QK78 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3139J3QK78 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3139J3QK78 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Gm3139J3QK78 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.89■□□□□ 0.77
Gm3139J3QK78 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3139J3QK78 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3139J3QK78 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3139J3QK78 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Gm3139J3QK78 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Gm3139J3QK78 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.87■□□□□ 0.77
Gm3139J3QK78 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Gm3139J3QK78 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3139J3QK78 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Gm3139J3QK78 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.87■□□□□ 0.77
Gm3139J3QK78 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Gm3139J3QK78 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.86■□□□□ 0.77
Gm3139J3QK78 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Gm3139J3QK78 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Gm26833-201ENSMUST00000180899 440 ntBASIC19.86■□□□□ 0.77
Gm3139J3QK78 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3139J3QK78 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3139J3QK78 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3139J3QK78 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3139J3QK78 Smad6-203ENSMUST00000179458 273 ntBASIC19.85■□□□□ 0.77
Gm3139J3QK78 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3139J3QK78 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Gm3139J3QK78 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3139J3QK78 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3139J3QK78 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Gm3139J3QK78 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3139J3QK78 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3139J3QK78 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3139J3QK78 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms