Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc188F6WEU2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc188F6WEU2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.55■□□□□ 0.88
Ccdc188F6WEU2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc188F6WEU2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Gm9987-201ENSMUST00000069768 567 ntBASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc188F6WEU2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ccdc188F6WEU2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc188F6WEU2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc188F6WEU2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.52■□□□□ 0.88
Ccdc188F6WEU2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc188F6WEU2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc188F6WEU2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ccdc188F6WEU2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc188F6WEU2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc188F6WEU2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc188F6WEU2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc188F6WEU2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.51■□□□□ 0.87
Ccdc188F6WEU2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.51■□□□□ 0.87
Ccdc188F6WEU2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc188F6WEU2 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.51■□□□□ 0.87
Ccdc188F6WEU2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ccdc188F6WEU2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc188F6WEU2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc188F6WEU2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc188F6WEU2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc188F6WEU2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc188F6WEU2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc188F6WEU2 Gm13146-201ENSMUST00000118508 780 ntBASIC20.49■□□□□ 0.87
Ccdc188F6WEU2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Ccdc188F6WEU2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc188F6WEU2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc188F6WEU2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc188F6WEU2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc188F6WEU2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc188F6WEU2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Gm5643-201ENSMUST00000117081 966 ntBASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc188F6WEU2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc188F6WEU2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ccdc188F6WEU2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc188F6WEU2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc188F6WEU2 Gm21362-201ENSMUST00000194272 928 ntBASIC20.44■□□□□ 0.86
Ccdc188F6WEU2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms