Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.45■□□□□ 0.86
Atf6F6VAN0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.45■□□□□ 0.86
Atf6F6VAN0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Mir6236-201ENSMUST00000184437 123 ntBASIC20.44■□□□□ 0.86
Atf6F6VAN0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Atf6F6VAN0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.43■□□□□ 0.86
Atf6F6VAN0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atf6F6VAN0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Atf6F6VAN0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Atf6F6VAN0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Atf6F6VAN0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf6F6VAN0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf6F6VAN0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf6F6VAN0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Atf6F6VAN0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Atf6F6VAN0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf6F6VAN0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atf6F6VAN0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf6F6VAN0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf6F6VAN0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf6F6VAN0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf6F6VAN0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf6F6VAN0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf6F6VAN0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf6F6VAN0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf6F6VAN0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Atf6F6VAN0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atf6F6VAN0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf6F6VAN0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.38■□□□□ 0.85
Atf6F6VAN0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf6F6VAN0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.38■□□□□ 0.85
Atf6F6VAN0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.38■□□□□ 0.85
Atf6F6VAN0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Atf6F6VAN0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf6F6VAN0 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.37■□□□□ 0.85
Atf6F6VAN0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Atf6F6VAN0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms