Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ptchd4B9EKX1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 Gm18671-201ENSMUST00000214826 683 ntBASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ptchd4B9EKX1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ptchd4B9EKX1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ptchd4B9EKX1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ptchd4B9EKX1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ptchd4B9EKX1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.5■■□□□ 1.03
Ptchd4B9EKX1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.5■■□□□ 1.03
Ptchd4B9EKX1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ptchd4B9EKX1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptchd4B9EKX1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Gm37179-201ENSMUST00000194862 823 ntBASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Gm42778-201ENSMUST00000199644 553 ntBASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 AV356131-201ENSMUST00000206201 750 ntBASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptchd4B9EKX1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptchd4B9EKX1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ptchd4B9EKX1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptchd4B9EKX1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms