Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm12887B1AVM1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Gm12887B1AVM1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.08■□□□□ 0.17
Gm12887B1AVM1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm12887B1AVM1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm12887B1AVM1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm12887B1AVM1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm12887B1AVM1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm12887B1AVM1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm12887B1AVM1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm12887B1AVM1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm12887B1AVM1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm12887B1AVM1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm12887B1AVM1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.07■□□□□ 0.16
Gm12887B1AVM1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Golph3-205ENSMUST00000228671 2842 ntBASIC16.06■□□□□ 0.16
Gm12887B1AVM1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm12887B1AVM1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Gm12887B1AVM1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm12887B1AVM1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm12887B1AVM1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms