Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a6B1AVK5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Col4a6B1AVK5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a6B1AVK5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a6B1AVK5 Gm13148-201ENSMUST00000118892 745 ntBASIC20.93■□□□□ 0.94
Col4a6B1AVK5 Gm10653-202ENSMUST00000139570 835 ntBASIC20.93■□□□□ 0.94
Col4a6B1AVK5 Gm12441-201ENSMUST00000121806 588 ntBASIC20.93■□□□□ 0.94
Col4a6B1AVK5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.93■□□□□ 0.94
Col4a6B1AVK5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a6B1AVK5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Col4a6B1AVK5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Gm7514-201ENSMUST00000209475 934 ntBASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a6B1AVK5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a6B1AVK5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a6B1AVK5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a6B1AVK5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a6B1AVK5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.9■□□□□ 0.94
Col4a6B1AVK5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.89■□□□□ 0.94
Col4a6B1AVK5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.89■□□□□ 0.94
Col4a6B1AVK5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a6B1AVK5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a6B1AVK5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a6B1AVK5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a6B1AVK5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a6B1AVK5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a6B1AVK5 Gm13146-201ENSMUST00000118508 780 ntBASIC20.89■□□□□ 0.93
Col4a6B1AVK5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.89■□□□□ 0.93
Col4a6B1AVK5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a6B1AVK5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a6B1AVK5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a6B1AVK5 Gm4968-201ENSMUST00000071458 858 ntBASIC20.88■□□□□ 0.93
Col4a6B1AVK5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a6B1AVK5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a6B1AVK5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a6B1AVK5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a6B1AVK5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col4a6B1AVK5 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.86■□□□□ 0.93
Col4a6B1AVK5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a6B1AVK5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
Col4a6B1AVK5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a6B1AVK5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Col4a6B1AVK5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.86■□□□□ 0.93
Col4a6B1AVK5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a6B1AVK5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Col4a6B1AVK5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a6B1AVK5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms