Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm11127A7VMS2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.53■□□□□ 0.4
Gm11127A7VMS2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm11127A7VMS2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Gm45444-201ENSMUST00000211394 898 ntBASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm11127A7VMS2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm11127A7VMS2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm11127A7VMS2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm11127A7VMS2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm11127A7VMS2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm11127A7VMS2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm11127A7VMS2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm11127A7VMS2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gm11127A7VMS2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm11127A7VMS2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm11127A7VMS2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm11127A7VMS2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm11127A7VMS2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm11127A7VMS2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm11127A7VMS2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Gm13238-201ENSMUST00000117655 780 ntBASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms