Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a4A2AX52 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a4A2AX52 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a4A2AX52 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a4A2AX52 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a4A2AX52 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a4A2AX52 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a4A2AX52 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a4A2AX52 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Gm10252-201ENSMUST00000209541 832 ntBASIC16.81■□□□□ 0.28
Col6a4A2AX52 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a4A2AX52 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a4A2AX52 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a4A2AX52 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.8■□□□□ 0.28
Col6a4A2AX52 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a4A2AX52 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a4A2AX52 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a4A2AX52 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a4A2AX52 Gm7514-201ENSMUST00000209475 934 ntBASIC16.8■□□□□ 0.28
Col6a4A2AX52 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a4A2AX52 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a4A2AX52 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a4A2AX52 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a4A2AX52 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a4A2AX52 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a4A2AX52 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a4A2AX52 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a4A2AX52 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a4A2AX52 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a4A2AX52 Gm27801-201ENSMUST00000184174 223 ntBASIC16.77■□□□□ 0.28
Col6a4A2AX52 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.77■□□□□ 0.28
Col6a4A2AX52 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.77■□□□□ 0.28
Col6a4A2AX52 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a4A2AX52 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a4A2AX52 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a4A2AX52 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a4A2AX52 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a4A2AX52 Mir7071-201ENSMUST00000184847 69 ntBASIC16.76■□□□□ 0.27
Col6a4A2AX52 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a4A2AX52 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a4A2AX52 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Col6a4A2AX52 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.76■□□□□ 0.27
Col6a4A2AX52 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
Col6a4A2AX52 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a4A2AX52 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.76■□□□□ 0.27
Col6a4A2AX52 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a4A2AX52 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.75■□□□□ 0.27
Col6a4A2AX52 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col6a4A2AX52 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Mir5133-201ENSMUST00000174955 77 ntBASIC16.74■□□□□ 0.27
Col6a4A2AX52 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col6a4A2AX52 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms