Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tubb1A2AQ07 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tubb1A2AQ07 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tubb1A2AQ07 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Tubb1A2AQ07 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tubb1A2AQ07 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tubb1A2AQ07 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tubb1A2AQ07 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.47■□□□□ 0.87
Tubb1A2AQ07 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tubb1A2AQ07 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tubb1A2AQ07 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tubb1A2AQ07 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.46■□□□□ 0.87
Tubb1A2AQ07 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tubb1A2AQ07 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.45■□□□□ 0.86
Tubb1A2AQ07 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.45■□□□□ 0.86
Tubb1A2AQ07 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tubb1A2AQ07 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tubb1A2AQ07 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tubb1A2AQ07 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tubb1A2AQ07 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Mir6236-201ENSMUST00000184437 123 ntBASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tubb1A2AQ07 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Gm14117-201ENSMUST00000122417 843 ntBASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Gm45102-201ENSMUST00000207427 857 ntBASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tubb1A2AQ07 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tubb1A2AQ07 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.4■□□□□ 0.86
Tubb1A2AQ07 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tubb1A2AQ07 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tubb1A2AQ07 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.39■□□□□ 0.86
Tubb1A2AQ07 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tubb1A2AQ07 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tubb1A2AQ07 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Iqck-206ENSMUST00000208658 2891 ntBASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tubb1A2AQ07 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubb1A2AQ07 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.38■□□□□ 0.85
Tubb1A2AQ07 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms