Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav12d-1A0N8R0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav12d-1A0N8R0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-1A0N8R0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-1A0N8R0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-1A0N8R0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-1A0N8R0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav12d-1A0N8R0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Gm7143-201ENSMUST00000222811 859 ntBASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav12d-1A0N8R0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav12d-1A0N8R0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav12d-1A0N8R0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-1A0N8R0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-1A0N8R0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav12d-1A0N8R0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-1A0N8R0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-1A0N8R0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-1A0N8R0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav12d-1A0N8R0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav12d-1A0N8R0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms