Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm5580A0A0N4SVP8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm5580A0A0N4SVP8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm5580A0A0N4SVP8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
Gm5580A0A0N4SVP8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.71■■□□□ 1.07
Gm5580A0A0N4SVP8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm5580A0A0N4SVP8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.71■■□□□ 1.07
Gm5580A0A0N4SVP8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.7■■□□□ 1.06
Gm5580A0A0N4SVP8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Gm5580A0A0N4SVP8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Gm5580A0A0N4SVP8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm5580A0A0N4SVP8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm5580A0A0N4SVP8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm5580A0A0N4SVP8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Gm5580A0A0N4SVP8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.69■■□□□ 1.06
Gm5580A0A0N4SVP8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm5580A0A0N4SVP8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm5580A0A0N4SVP8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gm5580A0A0N4SVP8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Gm5580A0A0N4SVP8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm5580A0A0N4SVP8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm5580A0A0N4SVP8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.66■■□□□ 1.06
Gm5580A0A0N4SVP8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.66■■□□□ 1.06
Gm5580A0A0N4SVP8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm5580A0A0N4SVP8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Gm5580A0A0N4SVP8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm5580A0A0N4SVP8 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.64■■□□□ 1.05
Gm5580A0A0N4SVP8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Gm5580A0A0N4SVP8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm5580A0A0N4SVP8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gm5580A0A0N4SVP8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Gm5580A0A0N4SVP8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gm5580A0A0N4SVP8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Gm5580A0A0N4SVP8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gm5580A0A0N4SVP8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5580A0A0N4SVP8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Gm15546-201ENSMUST00000122095 826 ntBASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm5580A0A0N4SVP8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms