Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv16A0A0B4J1H3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Gm10232-201ENSMUST00000089221 720 ntBASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv16A0A0B4J1H3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Gm13238-201ENSMUST00000117655 780 ntBASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Iqck-206ENSMUST00000208658 2891 ntBASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv16A0A0B4J1H3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv16A0A0B4J1H3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv16A0A0B4J1H3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Mir6236-201ENSMUST00000184437 123 ntBASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trbv16A0A0B4J1H3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trbv16A0A0B4J1H3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Cap2-205ENSMUST00000225824 1634 ntBASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv16A0A0B4J1H3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms