Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Spcs1-204ENSMUST00000226782 949 ntBASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gm27454-201ENSMUST00000185090 204 ntBASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Trbv12-1A0A0B4J1H0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms