Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv2A0A0B4J1G8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trbv2A0A0B4J1G8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trbv2A0A0B4J1G8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.71■□□□□ 0.42
Trbv2A0A0B4J1G8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv2A0A0B4J1G8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trbv2A0A0B4J1G8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Gm45444-201ENSMUST00000211394 898 ntBASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv2A0A0B4J1G8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv2A0A0B4J1G8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv2A0A0B4J1G8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Trbv2A0A0B4J1G8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv2A0A0B4J1G8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv2A0A0B4J1G8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv2A0A0B4J1G8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Mir6538-201ENSMUST00000183713 110 ntBASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Gm10399-202ENSMUST00000202768 748 ntBASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv2A0A0B4J1G8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv2A0A0B4J1G8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv2A0A0B4J1G8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv2A0A0B4J1G8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Gm7143-201ENSMUST00000222811 859 ntBASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv2A0A0B4J1G8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms