Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-20A0A0A6YX66 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-20A0A0A6YX66 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-20A0A0A6YX66 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-20A0A0A6YX66 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-20A0A0A6YX66 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv1-20A0A0A6YX66 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv1-20A0A0A6YX66 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-20A0A0A6YX66 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Gm26833-201ENSMUST00000180899 440 ntBASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-20A0A0A6YX66 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-20A0A0A6YX66 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-20A0A0A6YX66 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms