Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.32■□□□□ 0.04
Trav6-4A0A075B6B4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-4A0A075B6B4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav6-4A0A075B6B4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-4A0A075B6B4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-4A0A075B6B4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-4A0A075B6B4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-4A0A075B6B4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trav6-4A0A075B6B4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6-4A0A075B6B4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-4A0A075B6B4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-4A0A075B6B4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-4A0A075B6B4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-4A0A075B6B4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6-4A0A075B6B4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-4A0A075B6B4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-4A0A075B6B4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-4A0A075B6B4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.27■□□□□ 0.04
Trav6-4A0A075B6B4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-4A0A075B6B4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-4A0A075B6B4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-4A0A075B6B4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-4A0A075B6B4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms