Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9d-1A0A075B699 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9d-1A0A075B699 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9d-1A0A075B699 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9d-1A0A075B699 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav9d-1A0A075B699 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Gm40881-201ENSMUST00000223397 166 ntBASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9d-1A0A075B699 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9d-1A0A075B699 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9d-1A0A075B699 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav9d-1A0A075B699 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-1A0A075B699 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav9d-1A0A075B699 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-1A0A075B699 Gm15820-201ENSMUST00000201566 728 ntBASIC15.28■□□□□ 0.04
Trav9d-1A0A075B699 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-1A0A075B699 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9d-1A0A075B699 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms