Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav18A0A075B656 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav18A0A075B656 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.3■□□□□ 0.2
Trav18A0A075B656 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav18A0A075B656 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.29■□□□□ 0.2
Trav18A0A075B656 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.29■□□□□ 0.2
Trav18A0A075B656 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav18A0A075B656 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav18A0A075B656 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav18A0A075B656 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav18A0A075B656 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav18A0A075B656 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav18A0A075B656 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.27■□□□□ 0.2
Trav18A0A075B656 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav18A0A075B656 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav18A0A075B656 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav18A0A075B656 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav18A0A075B656 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.26■□□□□ 0.19
Trav18A0A075B656 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav18A0A075B656 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Trav18A0A075B656 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav18A0A075B656 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav18A0A075B656 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav18A0A075B656 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav18A0A075B656 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav18A0A075B656 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav18A0A075B656 Gm15820-201ENSMUST00000201566 728 ntBASIC16.23■□□□□ 0.19
Trav18A0A075B656 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.23■□□□□ 0.19
Trav18A0A075B656 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav18A0A075B656 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav18A0A075B656 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Trav18A0A075B656 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav18A0A075B656 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms